Fit a Gamma-Poisson Generalized Linear Model


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Documentation for package ‘glmGamPoi’ version 1.16.0

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as.list.glmGamPoi Convert glmGamPoi object to a list
format.glmGamPoi Pretty print the result from glm_gp()
format.summary.glmGamPoi Pretty print the result from glm_gp()
glm_gp Fit a Gamma-Poisson Generalized Linear Model
loc_median_fit Estimate local median fit
overdispersion_mle Estimate the Overdispersion for a Vector of Counts
overdispersion_shrinkage Shrink the overdispersion estimates
predict.glmGamPoi Predict 'link' or 'response' values for Gamma-Poisson GLMs
print.glmGamPoi Pretty print the result from glm_gp()
print.summary.glmGamPoi Pretty print the result from glm_gp()
pseudobulk Create a 'SingleCellExperiment' containing pseudo-bulk samples
residuals.glmGamPoi Extract Residuals of Gamma Poisson Model
solve_lm_for_A Solve the equation Y = A B for A or B
solve_lm_for_B Solve the equation Y = A B for A or B
summary.glmGamPoi Pretty print the result from glm_gp()
test_de Test for Differential Expression
vars Quote grouping variables